STRINGSTRING
Psed_3625 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3625" - Alpha/beta hydrolase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3625Alpha/beta hydrolase (261 aa)    
Predicted Functional Partners:
Psed_1490
benzoyl-CoA-dihydrodiol lyase (585 aa)
 
          0.796
Psed_1489
benzoyl-CoA oxygenase subunit B (470 aa)
 
          0.791
Psed_3624
Hypothetical protein (131 aa)
              0.738
Psed_0975
Hypothetical protein (176 aa)
   
          0.641
Psed_1491
benzoate-CoA ligase (532 aa)
 
          0.609
Psed_5917
long-chain-fatty-acid--CoA ligase (633 aa)
 
          0.601
Psed_4219
Beta-lactamase domain-containing protein (319 aa)
   
          0.553
Psed_3623
PAS/PAC sensor protein (825 aa)
              0.532
Psed_6637
Phenylacetic acid degradation protein PaaD (152 aa)
 
          0.458
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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