STRINGSTRING
Psed_3664 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3664" - Galactokinase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3664Galactokinase (392 aa)    
Predicted Functional Partners:
Psed_3665
Galactose-1-phosphate uridylyltransferase (358 aa)
  0.999
Psed_2707
Aldose-1-epimerase (299 aa)
   
  0.989
Psed_3984
UDP-glucose 4-epimerase (319 aa)
 
 
  0.981
Psed_3666
DeoR family transcriptional regulator (264 aa)
 
     
  0.927
Psed_3667
SSS sodium solute transporter superfamily protein (566 aa)
 
 
      0.770
Psed_6212
Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase (332 aa)
 
 
  0.765
Psed_1850
Oxidoreductase domain-containing protein (735 aa)
   
 
  0.692
Psed_1476
Oxidoreductase domain-containing protein (352 aa)
 
 
  0.678
Psed_1370
LacI family transcriptional regulator (343 aa)
 
     
  0.644
Psed_2164
LacI family transcriptional regulator (344 aa)
 
     
  0.640
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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