STRINGSTRING
Psed_3675 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3675" - Transcriptional regulator CdaR in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3675Transcriptional regulator CdaR (407 aa)    
Predicted Functional Partners:
Psed_1791
Fatty acid desaturase (380 aa)
 
          0.730
Psed_1253
Thymidylate kinase (569 aa)
   
          0.701
Psed_1790
Ferredoxin (354 aa)
 
          0.690
Psed_3678
Squalene-associated FAD-dependent desaturase (477 aa)
 
          0.686
Psed_3682
Hopanoid biosynthesis associated radical SAM protein HpnH (334 aa)
              0.639
Psed_3681
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Converts 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) (509 aa)
              0.639
Psed_3680
Squalene-hopene cyclase (635 aa)
              0.639
Psed_3679
Dimethylallyltranstransferase (356 aa)
              0.639
Psed_3677
Squalene synthase HpnD (310 aa)
              0.639
Psed_3676
Squalene synthase HpnC (327 aa)
              0.639
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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