STRINGSTRING
Psed_3679 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3679" - Dimethylallyltranstransferase in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3679Dimethylallyltranstransferase (356 aa)    
Predicted Functional Partners:
Psed_3677
Squalene synthase HpnD (310 aa)
 
  0.995
Psed_3681
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Converts 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) (509 aa)
   
  0.993
Psed_3676
Squalene synthase HpnC (327 aa)
 
 
  0.967
Psed_0965
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Converts 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) (319 aa)
   
  0.954
Psed_2781
Phytoene synthase (336 aa)
   
  0.950
Psed_0949
UDP pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids (255 aa)
 
  0.948
Psed_3678
Squalene-associated FAD-dependent desaturase (477 aa)
 
     
  0.947
Psed_4475
UDP pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids (261 aa)
 
  0.940
Psed_5555
Trans-hexaprenyltranstransferase (331 aa)
 
 
0.936
Psed_3680
Squalene-hopene cyclase (635 aa)
 
   
  0.924
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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