STRINGSTRING
Psed_3694 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3694" - ABC transporter permease in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3694ABC transporter permease (321 aa)    
Predicted Functional Partners:
Psed_3693
Peptide ABC transporter ATPase (392 aa)
  0.992
Psed_3695
ABC transporter permease (347 aa)
  0.991
Psed_3692
Peptide ABC transporter ATPase (380 aa)
  0.990
Psed_3697
ABC transporter substrate-binding protein (541 aa)
  0.979
Psed_4647
Peptide ABC transporter ATPase (343 aa)
  0.949
Psed_6018
Peptide ABC transporter ATPase (338 aa)
  0.949
Psed_4089
Peptide ABC transporter ATPase (360 aa)
  0.945
Psed_6014
ABC transporter permease (310 aa)
  0.942
Psed_4649
ABC transporter permease (314 aa)
  0.942
Psed_4090
ABC transporter permease (337 aa)
  0.942
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (10%) [HD]