STRINGSTRING
Psed_3699 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3699" - Dimethylmenaquinone methyltransferase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3699Dimethylmenaquinone methyltransferase (227 aa)    
Predicted Functional Partners:
Psed_3700
LmbE family protein (246 aa)
 
   
    0.997
Psed_3705
Acetolactate synthase (566 aa)
       
    0.932
Psed_3925
Acetolactate synthase (549 aa)
       
    0.904
Psed_3157
Benzoylformate decarboxylase (524 aa)
       
    0.904
Psed_1820
Acetolactate synthase large subunit, biosynthetic type (652 aa)
       
    0.904
Psed_1449
Acetolactate synthase (578 aa)
       
    0.904
Psed_1821
Acetolactate synthase small subunit (168 aa)
         
    0.900
Psed_2466
Protocatechuate 4,5-dioxygenase (285 aa)
 
     
  0.865
Psed_2465
Extradiol ring-cleavage dioxygenase class III protein subunit A (119 aa)
 
     
  0.822
Psed_4635
Isocitrate lyase and phosphorylmutase (300 aa)
       
  0.801
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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