STRINGSTRING
Psed_3739 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3739" - NADPH:quinone reductase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3739NADPH-quinone reductase (341 aa)    
Predicted Functional Partners:
Psed_3740
long-chain-fatty-acid--CoA ligase (553 aa)
   
   
  0.871
Psed_3741
Cyclase (306 aa)
              0.859
Psed_3924
L-threonine 3-dehydrogenase (333 aa)
 
   
  0.818
Psed_3738
Hypothetical protein (153 aa)
              0.792
Psed_4439
Maleylacetate reductase (383 aa)
   
 
  0.745
Psed_3024
Maleylacetate reductase (352 aa)
   
 
  0.745
Psed_2272
Maleylacetate reductase (367 aa)
   
 
  0.745
Psed_2224
Maleylacetate reductase (360 aa)
   
 
  0.745
Psed_0665
Maleylacetate reductase (380 aa)
   
 
  0.745
Psed_0301
Alcohol dehydrogenase (391 aa)
   
 
  0.745
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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