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Psed_3743 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3743" - 3-hydroxyisobutyrate dehydrogenase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_37433-hydroxyisobutyrate dehydrogenase (297 aa)    
Predicted Functional Partners:
Psed_3762
Methylmalonate-semialdehyde dehydrogenase (498 aa)
   
  0.938
Psed_2977
Betaine-aldehyde dehydrogenase (491 aa)
   
  0.938
Psed_4414
3-hydroxyisobutyryl-CoA hydrolase (346 aa)
 
 
  0.933
Psed_3745
Cupin (130 aa)
              0.873
Psed_3744
Carboxymuconolactone decarboxylase (146 aa)
 
   
  0.871
Psed_3742
alpha-methylacyl-CoA racemase (393 aa)
              0.864
Psed_5261
propionyl-CoA carboxylase (553 aa)
   
 
  0.856
Psed_0517
propionyl-CoA carboxylase (465 aa)
   
 
  0.856
Psed_4112
butyryl-CoA dehydrogenase (383 aa)
   
 
  0.841
Psed_2575
butyryl-CoA dehydrogenase (375 aa)
   
 
  0.841
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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