STRINGSTRING
Psed_3746 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3746" - IclR family transcriptional regulator in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3746IclR family transcriptional regulator (251 aa)    
Predicted Functional Partners:
Psed_3747
Amino acid permease (516 aa)
 
          0.919
Psed_3744
Carboxymuconolactone decarboxylase (146 aa)
         
  0.657
Psed_3742
alpha-methylacyl-CoA racemase (393 aa)
         
  0.634
Psed_3743
3-hydroxyisobutyrate dehydrogenase (297 aa)
         
  0.597
Psed_3745
Cupin (130 aa)
              0.595
Psed_2645
Hypothetical protein (316 aa)
   
          0.568
Psed_3035
3-oxoacid CoA-transferase subunit A (482 aa)
         
  0.526
Psed_3749
Copper amine oxidase domain-containing protein (633 aa)
 
          0.469
Psed_3748
Amino acid permease (487 aa)
 
          0.466
leuD
3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate (198 aa)
   
        0.425
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (11%) [HD]