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Psed_3765 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3765" - Hrp-dependent type III effector-domain-containing protein in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3765Hrp-dependent type III effector-domain-containing protein (489 aa)    
Predicted Functional Partners:
Psed_3764
6-phosphogluconate dehydrogenase (304 aa)
   
  0.989
Psed_3766
GntR family transcriptional regulator (233 aa)
 
          0.893
Psed_3763
Short-chain dehydrogenase/reductase SDR (278 aa)
              0.862
Psed_3889
2-hydroxy-3-oxopropionate reductase (296 aa)
   
  0.762
Psed_3767
NAD-dependent epimerase/dehydratase (319 aa)
              0.672
Psed_3512
Hypothetical protein (248 aa)
   
          0.611
Psed_6461
3-hydroxyisobutyrate dehydrogenase (300 aa)
   
  0.554
Psed_6464
6-phosphogluconate dehydrogenase (312 aa)
 
   
  0.523
Psed_6156
methylcrotonoyl-CoA carboxylase (666 aa)
     
        0.513
Psed_5275
Carbamoyl-phosphate synthase L chain ATP-binding protein (583 aa)
     
        0.513
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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