STRINGSTRING
Psed_3776 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3776" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3776Hypothetical protein (173 aa)    
Predicted Functional Partners:
Psed_3775
Hypothetical protein (128 aa)
 
          0.810
Psed_3774
ECF subfamily RNA polymerase sigma-24 subunit (405 aa)
 
        0.751
Psed_3777
Glyoxalase/bleomycin resistance protein/dioxygenase (128 aa)
              0.703
Psed_4118
Hypothetical protein (113 aa)
 
          0.651
Psed_3778
DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3’-5’ exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII (399 aa)
              0.581
Psed_1919
Hypothetical protein (244 aa)
 
          0.532
Psed_0377
Hypothetical protein (121 aa)
 
          0.519
Psed_6099
Glyoxalase/bleomycin resistance protein/dioxygenase (146 aa)
 
          0.518
Psed_3956
Hypothetical protein (130 aa)
 
          0.505
Psed_3779
PadR-like family transcriptional regulator (206 aa)
              0.467
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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