STRINGSTRING
Psed_3795 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3795" - Bifunctional deaminase-reductase domain-containing protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3795Bifunctional deaminase-reductase domain-containing protein (184 aa)    
Predicted Functional Partners:
Psed_3430
Riboflavin biosynthesis protein RibD (385 aa)
       
  0.935
Psed_5878
Bifunctional deaminase-reductase domain-containing protein (204 aa)
 
          0.783
Psed_1930
Bifunctional deaminase-reductase domain-containing protein (192 aa)
   
          0.740
Psed_3588
DNA polymerase I (939 aa)
   
   
  0.670
Psed_0906
Bifunctional deaminase-reductase domain-containing protein (180 aa)
   
          0.610
Psed_3794
Type 11 methyltransferase (207 aa)
              0.604
Psed_0985
Deaminase-reductase domain-containing protein (198 aa)
   
          0.599
Psed_5452
Ribonucleotide-diphosphate reductase subunit beta (324 aa)
   
   
  0.572
Psed_0528
Bifunctional deaminase-reductase domain-containing protein (200 aa)
   
          0.570
Psed_0002
DNA polymerase III subunit beta; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (376 aa)
   
   
  0.568
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (15%) [HD]