STRINGSTRING
Psed_3807 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3807" - Pseudouridine synthase in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3807Pseudouridine synthase (252 aa)    
Predicted Functional Partners:
der
GTP-binding protein engA; GTPase that plays an essential role in the late steps of ribosome biogenesis (486 aa)
 
   
  0.916
Psed_3808
Chromosome segregation and condensation protein ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves (258 aa)
 
   
  0.856
Psed_3810
Cobyrinic acid ac-diamide synthase (311 aa)
   
   
  0.824
Psed_3806
Chorismate mutase (120 aa)
 
          0.817
Psed_3809
Chromosome segregation and condensation protein ScpA (282 aa)
 
   
  0.812
cmk
Cytidylate kinase (236 aa)
 
        0.769
Psed_4768
Methyltransferase (187 aa)
 
        0.716
Psed_3804
Phospholipid/glycerol acyltransferase (221 aa)
 
          0.715
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (298 aa)
 
   
  0.676
rsmI
Ribosomal RNA small subunit methyltransferase I; Catalyzes the 2’-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA (282 aa)
 
   
  0.672
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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