STRINGSTRING
Psed_3816 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3816" - Hypothetical protein in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3816Hypothetical protein (306 aa)    
Predicted Functional Partners:
Psed_3817
Hypothetical protein (394 aa)
 
        0.973
Psed_3818
DNA repair protein RecN (614 aa)
 
        0.712
Psed_3820
Hemolysin A (266 aa)
   
        0.673
nadK
Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2’-hydroxyl of the adenosine moiety of NAD to yield NADP (315 aa)
   
        0.672
Psed_3814
NUDIX hydrolase (210 aa)
   
        0.661
pyrG
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen (588 aa)
   
        0.660
Psed_0394
Hypothetical protein (211 aa)
   
          0.657
Psed_4793
Hypothetical protein (191 aa)
   
          0.653
Psed_5151
Hypothetical protein (146 aa)
   
          0.649
Psed_3980
Alanine rich lipoprotein LppW (323 aa)
   
        0.645
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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