STRINGSTRING
Psed_3823 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3823" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3823Hypothetical protein (334 aa)    
Predicted Functional Partners:
Psed_3822
HAD-superfamily hydrolase (352 aa)
          0.967
nadK
Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2’-hydroxyl of the adenosine moiety of NAD to yield NADP (315 aa)
 
          0.736
Psed_3818
DNA repair protein RecN (614 aa)
 
          0.716
Psed_1097
UvrD/REP helicase (1224 aa)
   
          0.688
Psed_3820
Hemolysin A (266 aa)
              0.686
Psed_2115
Hypothetical protein (700 aa)
   
          0.652
Psed_3275
Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters (113 aa)
   
          0.624
Psed_5203
Hypothetical protein (159 aa)
   
          0.608
Psed_3162
Regulatory protein MerR (207 aa)
   
          0.595
Psed_3821
Hypothetical protein (88 aa)
              0.590
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: very high (100%) [HD]