STRINGSTRING
Psed_3863 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3863" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3863Hypothetical protein (140 aa)    
Predicted Functional Partners:
Psed_3267
Glyoxalase/bleomycin resistance protein/dioxygenase (138 aa)
   
          0.662
Psed_3927
Hypothetical protein (192 aa)
   
          0.615
Psed_3865
Hypothetical protein (413 aa)
              0.612
Psed_3864
Hypothetical protein (115 aa)
              0.612
Psed_6302
Hypothetical protein (245 aa)
   
          0.529
Psed_1897
DsbA oxidoreductase (208 aa)
   
          0.521
Psed_5709
Hypothetical protein (101 aa)
   
          0.493
Psed_1298
Glutaredoxin-like protein (114 aa)
   
          0.486
Psed_0209
Hypothetical protein (184 aa)
   
          0.461
Psed_6522
Hypothetical protein (137 aa)
   
          0.446
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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