STRINGSTRING
Psed_3890 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3890" - Glyoxylate carboligase in Pseudonocardia dioxanivorans
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3890Glyoxylate carboligase (597 aa)    
Predicted Functional Partners:
Psed_3888
Hydroxypyruvate isomerase; Catalyzes the reversible isomerization between hydroxypyruvate and 2-hydroxy-3-oxopropanoate (also termed tartronate semialdehyde) (274 aa)
 
 
  0.996
Psed_3889
2-hydroxy-3-oxopropionate reductase (296 aa)
 
 
  0.993
Psed_4949
Hydroxypyruvate isomerase; Catalyzes the reversible isomerization between hydroxypyruvate and 2-hydroxy-3-oxopropanoate (also termed tartronate semialdehyde) (282 aa)
 
 
  0.987
Psed_4788
D-lactate dehydrogenase (483 aa)
       
  0.930
Psed_4783
D-lactate dehydrogenase (484 aa)
       
  0.930
glcB
Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA (733 aa)
       
  0.917
Psed_5022
D-lactate dehydrogenase (490 aa)
       
  0.916
Psed_2201
D-lactate dehydrogenase (444 aa)
       
  0.916
Psed_4790
Hypothetical protein (429 aa)
       
  0.915
Psed_4785
Hypothetical protein (459 aa)
       
  0.915
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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