STRINGSTRING
Psed_3905 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3905" - Fumarylacetoacetate in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3905Fumarylacetoacetate (FAA) hydrolase (304 aa)    
Predicted Functional Partners:
Psed_3906
Luciferase-like protein (426 aa)
   
        0.864
Psed_3907
Beta-lactamase domain-containing protein (310 aa)
            0.808
Psed_6345
Homogentisate 12-dioxygenase (399 aa)
 
   
  0.732
Psed_1410
4-hydroxyphenylpyruvate dioxygenase (387 aa)
 
   
  0.657
Psed_0002
DNA polymerase III subunit beta; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (376 aa)
     
      0.609
Psed_3904
CO dehydrogenase maturation factor-like protein (316 aa)
              0.566
Psed_6453
Glyoxalase/bleomycin resistance protein/dioxygenase (200 aa)
   
   
  0.472
Psed_4441
Glyoxalase/bleomycin resistance protein/dioxygenase (192 aa)
   
   
  0.472
rpoC
DNA-directed RNA polymerase subunit beta’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1300 aa)
     
    0.470
Psed_3903
Hypothetical protein (131 aa)
              0.462
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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