STRINGSTRING
Psed_3923 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3923" - Phthalate 4,5-dioxygenase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3923Phthalate 4,5-dioxygenase (442 aa)    
Predicted Functional Partners:
Psed_4289
Aromatic-ring-hydroxylating dioxygenase subunit beta (170 aa)
 
 
  0.880
Psed_3922
Hypothetical protein (84 aa)
              0.859
Psed_2475
Rieske (2Fe-2S) domain-containing protein (121 aa)
 
 
  0.677
Psed_6319
Rieske (2Fe-2S) domain-containing protein (145 aa)
 
 
  0.667
Psed_2466
Protocatechuate 4,5-dioxygenase (285 aa)
 
     
  0.645
Psed_3921
Phthalate 4,5-dioxygenase (460 aa)
 
       
0.629
Psed_6060
Rieske (2Fe-2S) domain-containing protein (132 aa)
 
 
  0.625
Psed_1440
Rieske (2Fe-2S) domain-containing protein (118 aa)
 
 
  0.608
Psed_0811
Rieske (2Fe-2S) domain-containing protein (108 aa)
 
 
  0.607
Psed_2465
Extradiol ring-cleavage dioxygenase class III protein subunit A (119 aa)
 
          0.586
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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