STRINGSTRING
Psed_3933 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3933" - NADPH:quinone reductase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3933NADPH-quinone reductase (321 aa)    
Predicted Functional Partners:
Psed_3935
GntR family transcriptional regulator (221 aa)
              0.778
Psed_3934
Major facilitator superfamily protein (405 aa)
              0.775
Psed_0598
NADPH-quinone reductase (338 aa)
   
          0.763
Psed_0789
NADPH-quinone reductase (336 aa)
   
          0.757
Psed_3739
NADPH-quinone reductase (341 aa)
 
   
  0.707
Psed_4409
methylmalonyl-CoA mutase large subunit (1081 aa)
         
  0.623
Psed_4248
NADPH dehydrogenase (748 aa)
   
 
  0.616
Psed_5659
(R)-benzylsuccinyl-CoA dehydrogenase (401 aa)
 
        0.579
Psed_5687
2,4-dienoyl-CoA reductase (650 aa)
   
 
  0.576
Psed_1556
2,4-dienoyl-CoA reductase (675 aa)
   
 
  0.576
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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