STRINGSTRING
Psed_3941 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3941" - Glyoxalase/bleomycin resistance protein/dioxygenase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3941Glyoxalase/bleomycin resistance protein/dioxygenase (256 aa)    
Predicted Functional Partners:
Psed_4874
Glyoxalase/bleomycin resistance protein/dioxygenase (120 aa)
   
          0.586
Psed_3940
Hypothetical protein (331 aa)
              0.541
Psed_6621
Type 11 helix-turn-helix protein (318 aa)
   
        0.431
Psed_5887
DeoR family transcriptional regulator (333 aa)
   
        0.431
Psed_5717
DeoR family transcriptional regulator (315 aa)
   
        0.431
Psed_4058
Regulatory protein DeoR (319 aa)
   
        0.431
Psed_3290
Transcriptional regulator protein (346 aa)
   
        0.431
Psed_3289
Transcriptional regulator protein (322 aa)
   
        0.431
Psed_2269
Helix-turn-helix type 11 domain-containing protein (346 aa)
   
        0.431
Psed_1704
Transcriptional regulator (321 aa)
   
        0.431
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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