STRINGSTRING
Psed_3967 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3967" - GCN5-like N-acetyltransferase in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3967GCN5-like N-acetyltransferase (365 aa)    
Predicted Functional Partners:
glnE
Glutamate-ammonia-ligase adenylyltransferase; Adenylation and deadenylation of glutamate--ammonia ligase (1008 aa)
              0.810
Psed_3968
Glutamine synthetase (447 aa)
              0.721
Psed_5578
LuxR family transcriptional regulator (932 aa)
   
          0.576
Psed_2489
Hypothetical protein (351 aa)
   
          0.545
Psed_0257
Hypothetical protein (372 aa)
   
          0.539
Psed_4319
LuxR family transcriptional regulator (938 aa)
   
          0.537
Psed_3262
Hypothetical protein (238 aa)
   
          0.528
Psed_3969
TAP domain-containing protein (551 aa)
              0.519
Psed_1324
Helix-turn-helix domain-containing protein (102 aa)
   
          0.492
Psed_2823
Abortive infection protein (244 aa)
   
          0.445
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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