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Psed_3973 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3973" - Ribonuclease II in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3973Ribonuclease II (474 aa)    
Predicted Functional Partners:
rph
Ribonuclease PH; Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates (251 aa)
   
  0.998
Psed_2891
3’-5’ exonuclease (394 aa)
   
  0.986
rnz
Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3’- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3’-trailer from precursor tRNA (307 aa)
     
  0.935
Psed_5301
Ribonuclease (355 aa)
       
    0.901
rnpA
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5’-leader sequence from pre-tRNA to produce the mature 5’-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5’-leader sequence and broadening the substrate specificity of the ribozyme (119 aa)
         
    0.900
Psed_1835
NUDIX hydrolase (312 aa)
   
  0.886
Psed_6673
NUDIX hydrolase (164 aa)
   
  0.865
Psed_6658
NUDIX hydrolase (209 aa)
   
  0.865
Psed_6576
ATP-binding membrane protein (198 aa)
   
  0.865
Psed_6511
NUDIX hydrolase (232 aa)
   
  0.865
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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