STRINGSTRING
Psed_3982 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3982" - Histone deacetylase in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3982Histone deacetylase (388 aa)    
Predicted Functional Partners:
Psed_3981
GCN5-like N-acetyltransferase (951 aa)
 
 
  0.979
Psed_3630
SNF2-like protein (1053 aa)
 
  0.919
Psed_6330
Helicase (716 aa)
   
  0.904
Psed_5711
Microtubule-severing ATPase (802 aa)
 
    0.876
Psed_3319
Proteasome ATPase; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a ’key in a lock’ to induce gate opening and therefore regulate proteolysis (604 aa)
 
    0.874
Psed_6251
CbbX protein (342 aa)
   
    0.856
Psed_6548
Microtubule-severing ATPase (403 aa)
   
    0.855
Psed_4523
NAD-dependent deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form (282 aa)
   
  0.852
Psed_6111
Silent information regulator protein Sir2 (258 aa)
   
  0.849
smc
Chromosome segregation protein SMC; Required for chromosome condensation and partitioning (1186 aa)
   
  0.844
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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