STRINGSTRING
Psed_3986 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3986" - Peptidase M23 in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3986Peptidase M23 (297 aa)    
Predicted Functional Partners:
Psed_6661
Peptidoglycan glycosyltransferase (754 aa)
 
   
  0.745
Psed_6492
Peptidoglycan glycosyltransferase (779 aa)
 
   
  0.742
Psed_3618
Glycosyl transferase protein (711 aa)
 
   
  0.741
Psed_3637
Peptidoglycan glycosyltransferase (687 aa)
 
   
  0.739
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine (422 aa)
 
 
  0.687
Psed_2801
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase (501 aa)
 
      0.682
Psed_2439
Peptidoglycan glycosyltransferase (717 aa)
 
   
  0.665
Psed_4870
Penicillin-binding protein transpeptidase (970 aa)
 
 
  0.654
Psed_0690
Peptidase M23 (430 aa)
   
          0.653
Psed_1572
Glycoside hydrolase protein (409 aa)
 
   
  0.601
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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