STRINGSTRING
Psed_3990 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3990" - Beta-lactamase domain-containing protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3990Beta-lactamase domain-containing protein (372 aa)    
Predicted Functional Partners:
Psed_4057
Hypothetical protein (783 aa)
     
      0.677
Psed_3989
Hypothetical protein (246 aa)
              0.625
Psed_3067
Tex-like protein (831 aa)
     
      0.619
Psed_3991
Hypothetical protein (111 aa)
              0.435
Psed_0113
Glutamine amidotransferase of anthranilate synthase (213 aa)
   
        0.430
Psed_3745
Cupin (130 aa)
 
          0.421
menA
1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK) (293 aa)
              0.412
Psed_3674
L-fuculose-phosphate aldolase (222 aa)
              0.412
Psed_2597
Class II aldolase/adducin family protein (251 aa)
              0.412
Psed_2202
Class II aldolase/adducin family protein (110 aa)
              0.412
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (13%) [HD]