STRINGSTRING
Psed_4034 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4034" - Appr-1-p processing domain-containing protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4034Appr-1-p processing domain-containing protein (169 aa)    
Predicted Functional Partners:
Psed_3563
ATPase AAA (456 aa)
 
        0.795
Psed_6111
Silent information regulator protein Sir2 (258 aa)
 
    0.702
Psed_4523
NAD-dependent deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form (282 aa)
 
    0.700
Psed_4033
5-formyltetrahydrofolate cyclo-ligase (258 aa)
              0.679
Psed_0937
Hypothetical protein (1307 aa)
 
 
    0.508
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (347 aa)
     
 
    0.455
Psed_6330
Helicase (716 aa)
   
    0.453
Psed_3630
SNF2-like protein (1053 aa)
   
    0.453
Psed_6591
Molecular chaperone DnaK (655 aa)
   
    0.445
Psed_6555
Molecular chaperone DnaK; Acts as a chaperone (618 aa)
   
    0.445
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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