STRINGSTRING
Psed_4043 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4043" - Threo-3-hydroxyaspartate ammonia-lyase in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4043Threo-3-hydroxyaspartate ammonia-lyase (294 aa)    
Predicted Functional Partners:
Psed_1820
Acetolactate synthase large subunit, biosynthetic type (652 aa)
 
  0.971
Psed_1449
Acetolactate synthase (578 aa)
 
  0.964
Psed_1821
Acetolactate synthase small subunit (168 aa)
   
 
  0.963
Psed_4150
3-isopropylmalate dehydrogenase (353 aa)
   
 
  0.962
leuB
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate (346 aa)
   
 
  0.962
Psed_0688
3-isopropylmalate dehydrogenase (379 aa)
   
 
  0.962
Psed_3925
Acetolactate synthase (549 aa)
   
  0.956
Psed_3705
Acetolactate synthase (566 aa)
   
  0.956
Psed_3157
Benzoylformate decarboxylase (524 aa)
   
  0.956
Psed_0938
Cystathionine beta-synthase (456 aa)
   
 
  0.939
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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