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Psed_4066 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4066" - Type III restriction protein res subunit in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4066Type III restriction protein res subunit (1028 aa)    
Predicted Functional Partners:
Psed_3588
DNA polymerase I (939 aa)
   
  0.950
Psed_1502
Helicase c2 (678 aa)
     
  0.946
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (92 aa)
     
    0.944
Psed_3283
5’-3’ exonuclease (312 aa)
   
  0.920
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (347 aa)
     
    0.919
rpoC
DNA-directed RNA polymerase subunit beta’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1300 aa)
     
  0.913
Psed_1083
UBA/THIF-type NAD/FAD binding protein (390 aa)
   
 
  0.881
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1175 aa)
     
  0.866
Psed_3144
Histidine kinase (602 aa)
   
 
  0.852
Psed_6303
ATP-dependent DNA ligase (118 aa)
     
 
  0.852
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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