STRINGSTRING
Psed_4106 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4106" - Catalase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4106Catalase (505 aa)    
Predicted Functional Partners:
Psed_5669
Manganese/iron superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (207 aa)
   
  0.983
Psed_2697
Phenylacetic acid degradation protein paaN (685 aa)
     
  0.943
Psed_2510
Aldehyde dehydrogenase (508 aa)
     
  0.941
Psed_2161
Aldehyde dehydrogenase (495 aa)
     
  0.941
Psed_1899
Aldehyde dehydrogenase (474 aa)
     
  0.941
Psed_1709
Aldehyde dehydrogenase (490 aa)
     
  0.941
Psed_1385
Aldehyde dehydrogenase (486 aa)
     
  0.941
Psed_2329
Peroxidase (212 aa)
   
 
  0.923
Psed_5022
D-lactate dehydrogenase (490 aa)
   
 
  0.915
Psed_4789
FAD linked oxidase domain-containing protein (392 aa)
   
 
  0.915
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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