STRINGSTRING
Psed_4112 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4112" - butyryl-CoA dehydrogenase in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4112butyryl-CoA dehydrogenase (383 aa)    
Predicted Functional Partners:
Psed_0649
3-hydroxybutyryl-CoA epimerase (720 aa)
   
  0.996
Psed_1735
enoyl-CoA hydratase (269 aa)
   
  0.986
Psed_3213
enoyl-CoA hydratase (259 aa)
   
  0.982
Psed_4414
3-hydroxyisobutyryl-CoA hydrolase (346 aa)
   
  0.982
Psed_6333
enoyl-CoA hydratase (299 aa)
   
  0.982
Psed_6217
enoyl-CoA hydratase (248 aa)
   
  0.982
Psed_4539
enoyl-CoA hydratase (267 aa)
   
  0.982
Psed_1344
enoyl-CoA hydratase (309 aa)
   
  0.982
Psed_6174
acetyl-CoA acetyltransferase (426 aa)
   
 
  0.980
Psed_6148
acetyl-CoA acetyltransferase (403 aa)
   
 
  0.980
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (8%) [HD]