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Psed_4137 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4137" - L-threonine 3-dehydrogenase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4137L-threonine 3-dehydrogenase (369 aa)    
Predicted Functional Partners:
Psed_4138
formyl-CoA transferase (379 aa)
   
        0.865
Psed_3924
L-threonine 3-dehydrogenase (333 aa)
   
          0.778
Psed_3714
L-iditol 2-dehydrogenase (349 aa)
   
          0.778
Psed_2084
Molecular chaperone GroES (344 aa)
   
          0.778
Psed_2362
S-(hydroxymethyl)glutathione dehydrogenase (399 aa)
   
          0.716
Psed_4136
Hypothetical protein (449 aa)
              0.629
Psed_3673
Xylulokinase (494 aa)
   
   
  0.611
Psed_1103
Xylulokinase (468 aa)
   
   
  0.611
Psed_4193
3-oxoacyl-ACP reductase (249 aa)
   
   
  0.569
Psed_4101
3-oxoacyl-ACP reductase (265 aa)
   
   
  0.569
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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