STRINGSTRING
Psed_4179 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4179" - 4-hydroxy-2-oxovalerate aldolase in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_41794-hydroxy-2-oxovalerate aldolase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta-cleavage pathway for the degradation of aromatic compounds (344 aa)    
Predicted Functional Partners:
Psed_4178
Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta- cleavage pathway for the degradation of aromatic compounds (301 aa)
 
  0.999
Psed_2523
2-oxopent-4-enoate hydratase (252 aa)
 
 
  0.988
Psed_4293
2-oxopent-4-enoate hydratase (269 aa)
 
 
  0.988
Psed_2524
2-oxopent-4-enoate hydratase (267 aa)
 
 
  0.987
Psed_4285
2-oxopent-4-enoate hydratase (277 aa)
 
 
  0.987
Psed_4292
4-oxalocrotonate decarboxylase (256 aa)
 
   
  0.950
Psed_2510
Aldehyde dehydrogenase (508 aa)
   
 
  0.923
Psed_2161
Aldehyde dehydrogenase (495 aa)
   
 
  0.923
Psed_1899
Aldehyde dehydrogenase (474 aa)
   
 
  0.923
Psed_1709
Aldehyde dehydrogenase (490 aa)
   
 
  0.923
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (8%) [HD]