STRINGSTRING
Psed_4208 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4208" - Rieske in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4208Rieske (2Fe-2S) domain-containing protein (118 aa)    
Predicted Functional Partners:
Psed_4207
Rieske (2Fe-2S) domain-containing protein (340 aa)
 
          0.964
Psed_0075
Aromatic-ring-hydroxylating dioxygenase subunit beta (154 aa)
   
   
    0.909
Psed_1441
ferredoxin--NAD(+) reductase (410 aa)
 
  0.908
Psed_0810
ferredoxin--NAD(+) reductase (413 aa)
 
  0.907
Psed_5617
uroporphyrinogen-III C-methyltransferase (513 aa)
   
   
  0.864
Psed_1089
Nitrite reductase (NAD(P)H) (517 aa)
 
 
  0.840
Psed_1090
Nitrite reductase (NAD(P)H) large subunit (845 aa)
 
 
  0.830
Psed_2727
uroporphyrin-III C-methyltransferase (403 aa)
   
   
  0.828
Psed_1157
Rieske (2Fe-2S) domain-containing protein (117 aa)
 
 
  0.749
Psed_4299
Major facilitator superfamily protein (408 aa)
   
   
  0.747
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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