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Psed_4215 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4215" - Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4215Pyridoxamine 5’-phosphate oxidase-related FMN-binding protein (185 aa)    
Predicted Functional Partners:
Psed_4214
formyl-CoA transferase (382 aa)
              0.650
Psed_1542
Hypothetical protein (786 aa)
   
          0.639
Psed_4295
Hypothetical protein (266 aa)
   
          0.605
Psed_4407
Hypothetical protein (261 aa)
   
          0.575
Psed_2820
Hypothetical protein (273 aa)
   
          0.568
Psed_5035
TetR family transcriptional regulator (192 aa)
   
          0.558
Psed_4003
Hypothetical protein (151 aa)
   
          0.537
Psed_4297
Hypothetical protein (1703 aa)
   
          0.521
Psed_3675
Transcriptional regulator CdaR (407 aa)
   
          0.520
Psed_3347
Pyridoxamine 5’-phosphate oxidase-related FMN-binding protein (157 aa)
   
          0.517
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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