STRINGSTRING
Psed_4218 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4218" - Monooxygenase FAD-binding protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4218Monooxygenase FAD-binding protein (536 aa)    
Predicted Functional Partners:
Psed_4219
Beta-lactamase domain-containing protein (319 aa)
 
          0.963
Psed_6036
3-carboxyethylcatechol 2,3-dioxygenase (317 aa)
 
 
  0.937
Psed_0217
3-carboxyethylcatechol 2,3-dioxygenase (322 aa)
 
 
  0.931
Psed_5892
NADPH--hemoprotein reductase (1080 aa)
   
 
  0.643
Psed_1477
Cytochrome P450 (407 aa)
 
 
  0.580
Psed_0643
Fumarylacetoacetase (387 aa)
 
   
  0.564
Psed_1472
Cytochrome P450 (401 aa)
 
 
  0.557
Psed_1906
Beta-lactamase domain-containing protein (257 aa)
 
        0.549
kynU
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively (405 aa)
   
   
  0.545
Psed_3907
Beta-lactamase domain-containing protein (310 aa)
 
          0.529
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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