STRINGSTRING
Psed_4229 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4229" - Nitrate reductase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4229Nitrate reductase (817 aa)    
Predicted Functional Partners:
Psed_2417
4Fe-4S ferredoxin (286 aa)
   
  0.937
Psed_4230
Hypothetical protein (160 aa)
              0.875
Psed_0760
NADH dehydrogenase (ubiquinone) 30 kDa subunit (504 aa)
   
 
  0.760
Psed_1359
MoeA domain-containing protein domain I and II (400 aa)
 
   
  0.756
Psed_1090
Nitrite reductase (NAD(P)H) large subunit (845 aa)
   
  0.750
Psed_4301
Nitrate reductase subunit beta (580 aa)
   
 
  0.744
Psed_5714
Molybdenum cofactor synthesis domain-containing protein (413 aa)
 
   
  0.732
Psed_5617
uroporphyrinogen-III C-methyltransferase (513 aa)
   
   
  0.730
Psed_2727
uroporphyrin-III C-methyltransferase (403 aa)
   
   
  0.726
ureA
Urease subunit gamma (100 aa)
         
  0.712
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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