STRINGSTRING
Psed_4237 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4237" - Cobyrinic acid ac-diamide synthase in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4237Cobyrinic acid ac-diamide synthase (314 aa)    
Predicted Functional Partners:
Psed_6685
parB-like partition protein (320 aa)
 
 
  0.909
Psed_3023
Cobaltochelatase subunit CobN (1201 aa)
         
    0.900
Psed_3021
precorrin-8X methylmutase (208 aa)
         
    0.900
Psed_4238
Hypothetical protein (219 aa)
              0.859
xerD
Tyrosine recombinase xerC (307 aa)
 
   
  0.735
Psed_4628
DNA translocase FtsK (782 aa)
 
     
  0.724
Psed_4236
Hypothetical protein (392 aa)
              0.689
Psed_5227
DNA translocase FtsK (279 aa)
 
     
  0.667
Psed_3467
Integrase protein (331 aa)
 
   
  0.663
Psed_4240
GAF sensor-containing protein serine/threonine phosphatase (533 aa)
   
   
  0.661
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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