STRINGSTRING
Psed_4242 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4242" - Hypothetical protein in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4242Hypothetical protein (143 aa)    
Predicted Functional Partners:
Psed_2089
Microcompartments protein (109 aa)
 
   
  0.684
Psed_2082
Microcompartments protein (97 aa)
 
   
  0.683
Psed_2087
Ethanolamine utilization protein EutJ family protein (288 aa)
 
   
  0.638
Psed_1158
Monooxygenase component MmoB/DmpM (100 aa)
 
          0.596
Psed_2528
Catechol 2,3 dioxygenase (309 aa)
 
          0.558
Psed_4241
Gas vesicle structural protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure (99 aa)
              0.554
Psed_2527
Catechol 2,3 dioxygenase (304 aa)
 
          0.553
Psed_2088
Acetaldehyde dehydrogenase (462 aa)
 
   
  0.546
glcB
Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA (733 aa)
   
        0.537
Psed_1155
Phenol 2-monooxygenase (505 aa)
 
          0.530
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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