STRINGSTRING
Psed_4243 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4243" - PaaX family transcriptional regulator in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4243PaaX family transcriptional regulator (292 aa)    
Predicted Functional Partners:
Psed_2703
phenylacetate-CoA oxygenase subunit PaaJ (169 aa)
 
     
  0.737
Psed_2701
phenylacetate-CoA oxygenase subunit PaaH (115 aa)
 
     
  0.725
Psed_2700
phenylacetate-CoA oxygenase subunit PaaG (319 aa)
 
     
  0.708
Psed_2702
phenylacetate-CoA oxygenase subunit PaaI (304 aa)
 
     
  0.680
Psed_5080
Transcriptional regulator (241 aa)
 
          0.549
Psed_2696
phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) (441 aa)
 
     
  0.530
Psed_3636
Transcriptional regulator (223 aa)
 
          0.487
Psed_5910
phenylacetate--CoA ligase (461 aa)
 
     
  0.429
Psed_2541
phenylacetate--CoA ligase (453 aa)
 
     
  0.423
Psed_0649
3-hydroxybutyryl-CoA epimerase (720 aa)
         
  0.415
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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