STRINGSTRING
Psed_4260 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4260" - Diacylglycerol kinase catalytic subunit in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4260Diacylglycerol kinase catalytic subunit (426 aa)    
Predicted Functional Partners:
Psed_4261
Hypothetical protein (139 aa)
 
          0.690
Psed_4259
Hypothetical protein (405 aa)
              0.671
Psed_4262
RDD domain-containing protein (171 aa)
              0.585
Psed_4263
Hypothetical protein (279 aa)
              0.528
Psed_5218
Ribonuclease BN (291 aa)
   
          0.526
Psed_4277
Hypothetical protein (460 aa)
 
          0.517
Psed_6438
Hemerythrin HHE cation binding domain-containing protein (279 aa)
   
          0.465
Psed_4817
ABC transporter permease (271 aa)
   
          0.446
Psed_2029
Hypothetical protein (300 aa)
   
          0.426
Psed_6483
Hypothetical protein (401 aa)
   
          0.410
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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