STRINGSTRING
Psed_4265 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4265" - ATPase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4265ATPase (906 aa)    
Predicted Functional Partners:
Psed_4741
MgtC/SapB transporter (239 aa)
   
 
  0.945
Psed_4266
Sulfate transporter (586 aa)
   
 
  0.880
Psed_4264
Polyphosphate-nucleotide phosphotransferase (322 aa)
              0.833
Psed_4849
Heavy metal translocating P-type ATPase (810 aa)
 
 
  0.789
Psed_6160
Heavy metal translocating P-type ATPase (640 aa)
 
 
  0.787
Psed_2220
Heavy metal translocating P-type ATPase (807 aa)
 
 
0.717
Psed_1304
Heavy metal translocating P-type ATPase (737 aa)
 
 
0.714
Psed_6401
Heavy metal translocating P-type ATPase (1039 aa)
 
 
0.711
Psed_4360
Heavy metal translocating P-type ATPase (761 aa)
 
0.708
Psed_0039
Heavy metal translocating P-type ATPase (669 aa)
 
 
0.707
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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