STRINGSTRING
Psed_4269 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4269" - Ion transport 2 domain-containing protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4269Ion transport 2 domain-containing protein (163 aa)    
Predicted Functional Partners:
Psed_2645
Hypothetical protein (316 aa)
   
          0.740
Psed_5986
Hypothetical protein (144 aa)
 
          0.713
Psed_5992
Ribonuclease BN (359 aa)
   
          0.675
Psed_0486
Glyoxalase/bleomycin resistance protein/dioxygenase (208 aa)
   
          0.660
Psed_5987
Hypothetical protein (157 aa)
 
          0.615
Psed_4261
Hypothetical protein (139 aa)
 
          0.606
Psed_5451
Hypothetical protein (323 aa)
   
          0.553
Psed_5110
Xenobiotic-transporting ATPase (1286 aa)
   
          0.540
Psed_4268
Hypothetical protein (174 aa)
              0.512
Psed_4270
Hypothetical protein (183 aa)
              0.494
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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