STRINGSTRING
Psed_4280 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4280" - Major facilitator superfamily protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4280Major facilitator superfamily protein (449 aa)    
Predicted Functional Partners:
Psed_3759
Major facilitator superfamily protein (466 aa)
   
     
  0.807
Psed_2620
Major facilitator superfamily protein (440 aa)
   
     
  0.805
Psed_1564
4-hydroxybenzoate 3-monooxygenase (393 aa)
 
  0.715
Psed_3760
Major facilitator superfamily protein (439 aa)
   
          0.715
Psed_4281
Aldehyde dehydrogenase (507 aa)
   
        0.579
Psed_3070
Major facilitator superfamily protein (473 aa)
   
          0.534
Psed_4283
ferredoxin-NADP reductase (334 aa)
   
   
  0.530
Psed_3747
Amino acid permease (516 aa)
 
 
  0.529
Psed_2519
Phthalate 4,5-dioxygenase (418 aa)
 
   
  0.523
Psed_3923
Phthalate 4,5-dioxygenase (442 aa)
 
   
  0.511
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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