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Psed_4284 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4284" - Extradiol ring-cleavage dioxygenase class III protein subunit B in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4284Extradiol ring-cleavage dioxygenase class III protein subunit B (357 aa)    
Predicted Functional Partners:
Psed_4283
ferredoxin-NADP reductase (334 aa)
 
          0.877
Psed_4282
4Fe-4S ferredoxin (113 aa)
              0.805
Psed_4172
Sugar ABC transporter substrate-binding protein (391 aa)
   
          0.759
Psed_1874
Hypothetical protein (382 aa)
   
          0.755
Psed_2321
Sugar ABC transporter substrate-binding protein (395 aa)
   
          0.707
Psed_5926
AMP-dependent synthetase/ligase (458 aa)
   
          0.692
Psed_3028
Sugar ABC transporter substrate-binding protein (393 aa)
   
          0.683
Psed_0683
Sugar ABC transporter substrate-binding protein (392 aa)
   
          0.655
Psed_0509
ABC transporter substrate-binding protein (393 aa)
   
          0.642
Psed_4163
Sugar ABC transporter substrate-binding protein (393 aa)
   
          0.630
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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