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Psed_4419 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4419" - FAD-linked oxidoreductase in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4419FAD-linked oxidoreductase (439 aa)    
Predicted Functional Partners:
Psed_4416
Alanine racemase (397 aa)
          0.961
Psed_4420
NUDIX hydrolase (152 aa)
              0.796
Psed_4421
Alpha/beta hydrolase (286 aa)
 
          0.781
Psed_0175
UbiA prenyltransferase (306 aa)
       
  0.723
Psed_5322
(S)-2-hydroxy-acid oxidase (415 aa)
   
 
  0.682
Psed_5175
(S)-2-hydroxy-acid oxidase (406 aa)
   
 
  0.682
Psed_4052
(S)-2-hydroxy-acid oxidase (392 aa)
   
 
  0.682
Psed_2598
(S)-2-hydroxy-acid oxidase (407 aa)
   
 
  0.682
Psed_4418
TetR family transcriptional regulator (215 aa)
              0.668
Psed_4417
Major facilitator superfamily protein (394 aa)
              0.656
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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