STRINGSTRING
Psed_4437 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4437" - Salicylate 1-monooxygenase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4437Salicylate 1-monooxygenase (377 aa)    
Predicted Functional Partners:
Psed_6065
Catechol 1,2-dioxygenase (284 aa)
       
  0.918
Psed_3093
Catechol 1,2-dioxygenase (284 aa)
       
  0.918
Psed_0764
Catechol 1,2-dioxygenase (282 aa)
       
  0.918
Psed_4439
Maleylacetate reductase (383 aa)
   
   
  0.875
Psed_4438
Patatin (278 aa)
   
        0.859
Psed_4440
Maleylacetate reductase (331 aa)
              0.859
Psed_5068
Cupin (361 aa)
 
     
  0.731
Psed_4436
Pentachlorophenol monooxygenase (540 aa)
              0.728
Psed_4249
Cupin (370 aa)
 
     
  0.660
Psed_5892
NADPH--hemoprotein reductase (1080 aa)
   
 
  0.643
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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