STRINGSTRING
Psed_4438 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4438" - Patatin in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4438Patatin (278 aa)    
Predicted Functional Partners:
Psed_4437
Salicylate 1-monooxygenase (377 aa)
   
        0.859
Psed_4440
Maleylacetate reductase (331 aa)
              0.859
Psed_4439
Maleylacetate reductase (383 aa)
              0.859
Psed_4436
Pentachlorophenol monooxygenase (540 aa)
   
        0.728
Psed_4441
Glyoxalase/bleomycin resistance protein/dioxygenase (192 aa)
              0.626
Psed_0933
Pyridoxamine 5’-phosphate oxidase-related FMN-binding protein (151 aa)
   
          0.600
Psed_3979
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha (551 aa)
              0.560
Psed_0188
Glycosyltransferase (645 aa)
 
          0.533
Psed_2592
Hypothetical protein (62 aa)
   
          0.482
Psed_3903
Hypothetical protein (131 aa)
   
          0.476
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (10%) [HD]