STRINGSTRING
Psed_4484 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4484" - Cytidine deaminase in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4484Cytidine deaminase (122 aa)    
Predicted Functional Partners:
Psed_6243
Phosphoribulokinase/uridine kinase (315 aa)
         
    0.900
ybeY
Metalloprotease ybeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3’ terminus of the 16S rRNA (178 aa)
              0.881
Psed_4485
CBS domain-containing protein (515 aa)
              0.881
era
GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism (309 aa)
              0.881
Psed_4483
FAD dependent oxidoreductase (419 aa)
              0.859
Psed_1509
Mov34/MPN/PAD-1 family protein (157 aa)
   
          0.737
Psed_4487
PhoH family protein (369 aa)
              0.676
Psed_4584
Hypothetical protein (235 aa)
   
          0.649
Psed_6498
Oxyanion-translocating ATPase (342 aa)
   
          0.636
Psed_3926
Hypothetical protein (193 aa)
   
          0.622
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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