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Psed_4500 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4500" - Oxygen-independent coproporphyrinogen III oxidase in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
Psed_4500Oxygen-independent coproporphyrinogen III oxidase (406 aa)    
Predicted Functional Partners:
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (356 aa)
 
 
  0.955
Psed_2895
Protoporphyrinogen oxidase (484 aa)
   
 
  0.927
Psed_4501
Secretion protein HlyD family protein (787 aa)
 
          0.876
Psed_4503
Phosphonate-transporting ATPase (242 aa)
   
   
  0.873
Psed_4502
Hypothetical protein (410 aa)
              0.867
Psed_4504
RND family efflux transporter MFP subunit (484 aa)
              0.859
Psed_4499
Lipase class 2 (265 aa)
              0.759
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3’- to 5’-direction (750 aa)
 
        0.726
rlmN
Ribosomal RNA large subunit methyltransferase N; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs (368 aa)
 
   
  0.725
Psed_2811
Hypothetical protein (246 aa)
 
        0.594
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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